Daniel_AdediranforBioinformatics dexwel.hashnode.net·Feb 8, 2023Single cell objects interconversionMajorities are familiar with the availability of different single-cell objects due to the development of different tools to analyse single-cell data by different packages or libraries depending on the programming language being used. For example, the...Discuss·4 likes·36 readsdata
Darko Medinfordarkodatasci.hashnode.net·Jan 30, 2023Bioinformatics and Machine Learning. Cancer Classifier project - LIn this exemplary project, Cell line Expression atlas Gene expression data is used to create a state-of-the-art Machine learning model to classify leukemia and separate it from the other types of Cancer. You may find the code and additional data on t...Discuss·2 likes·277 readsbioinformatics
Belson Malcolm KutambeforBelson's blogmalcolmorian.hashnode.net·Sep 4, 2022The hidden cost of newlinesEarlier this week I faced an interesting issue.I was developing a prototype for a nextflow pipeline that will be used to manage a database.The prototype script was doing the following three things: 1. Get today's date in iso format(e.g. 2022.07.30) 2...Discuss·1 likebioinformatics
Dr. Aarun Bhardwajforaarunbhardwaj.hashnode.net·Apr 24, 2023Using python regex for finding patterns in genomic dataPython is a powerful programming language that is widely used in bioinformatics for analyzing genomic data. Python has a rich set of libraries and tools that can be used for analyzing genomic sequences. In this article, we will explore how to use Pyt...DiscussRegex
Farha ZeinforFarha Zeinfarhazein.hashnode.net·Mar 22, 2023Next generation sequencingTable of content Sequencing targets DNA/RNA Fragmentation Size selection Adaptor ligation immobilization to solid support Sequencing using NGS Sequencing reads Sequencing targets DNA/RNA we do sequencing in DNA/RNA molecules in fragmented fo...Discussdna
Bhagesh HunakuntiforCodeBeastbhagesh-1676061227245.hashnode.net·Mar 12, 2023NGS Data Analysis: Data Formats and Workflow ManagersIntroduction Next-generation sequencing (NGS) has revolutionized the field of genomics by allowing researchers to generate vast amounts of sequencing data quickly and cost-effective manner. However, the analysis of NGS data can be complex and challen...Discuss·1 like·197 readsNGS Data AnalysisNGS DATA ANALYSIS
Bhagesh HunakuntiforCodeBeastbhagesh-1676061227245.hashnode.net·Mar 5, 2023NGS Data Analysis: Sequence CleaningIntroduction Next-generation sequencing (NGS) technologies have revolutionized the field of genomics by enabling researchers to generate large amounts of sequence data quickly and at a lower cost than traditional sequencing methods. However, raw NGS ...Discuss·238 readsNGS Data Analysisbioinformatics
Bhagesh HunakuntiforCodeBeastbhagesh-1676061227245.hashnode.net·Feb 26, 2023NGS Data Analysis: IntroductionWhat is Next Generation Sequencing (NGS)? Next-generation sequencing (NGS), is a sequencing technique that allows for extremely fast, scalable, and high-throughput sequencing. It is used to identify the sequence of nucleotides in targeted areas of DN...Discuss·261 readsNGS Data Analysisbioinformatics
Daniel_AdediranforBioinformatics dexwel.hashnode.net·Feb 8, 2023Single cell objects interconversionMajorities are familiar with the availability of different single-cell objects due to the development of different tools to analyse single-cell data by different packages or libraries depending on the programming language being used. For example, the...Discuss·4 likes·36 readsdata
Darko Medinfordarkodatasci.hashnode.net·Jan 30, 2023Bioinformatics and Machine Learning. Cancer Classifier project - LIn this exemplary project, Cell line Expression atlas Gene expression data is used to create a state-of-the-art Machine learning model to classify leukemia and separate it from the other types of Cancer. You may find the code and additional data on t...Discuss·2 likes·277 readsbioinformatics
Cloud Genomics TrainingforCloudGenomics Trainingcloudgenomics.hashnode.net·Dec 4, 2022Exploring Genomic Data with PythonGenomic data analysis is an essential part of modern biology and medicine, and Python is an increasingly popular choice for working with this type of data. In this article, we will explore some of the tools and techniques that can be used to analyze ...Discuss·33 readsPython
Cloud Genomics TrainingforCloudGenomics Trainingcloudgenomics.hashnode.net·Dec 4, 2022Getting started with bioinformatics using PythonPython has become a popular choice for data scientists and bioinformaticians due to its simplicity, expressiveness, and rich ecosystem of libraries and tools. In this blog post, we will provide an introduction to bioinformatics and its applications i...Discuss·38 readsbioinformatics
Belson Malcolm KutambeforBelson's blogmalcolmorian.hashnode.net·Sep 4, 2022The hidden cost of newlinesEarlier this week I faced an interesting issue.I was developing a prototype for a nextflow pipeline that will be used to manage a database.The prototype script was doing the following three things: 1. Get today's date in iso format(e.g. 2022.07.30) 2...Discuss·1 likebioinformatics
